Delicious & Easy Sourdough Pumpkin Muffins: Your Ultimate Fall Treat
There’s nothing quite like the comforting aroma of freshly baked goods filling your home on a crisp autumn morning. These easy sourdough pumpkin muffins capture that cozy feeling perfectly, blending the nostalgic flavors of fall spices with the delightful tang of sourdough. Each muffin is a masterpiece of tender, moist crumb, offering a truly nourishing and irresistible treat. Whether you’re an experienced sourdough baker or just starting out, this recipe provides a fantastic way to utilize either active sourdough starter or leftover discard, ensuring no precious starter goes to waste.
Infused with real pumpkin puree, these muffins boast a beautiful golden hue and an incredibly soft texture that melts in your mouth. The classic pumpkin pie spice blend awakens the senses, bringing warmth and a depth of flavor that defines seasonal baking. What makes this recipe truly special is its simplicity and adaptability: you can whip up a batch quickly for an instant indulgence, or opt for a long fermentation to unlock even greater health benefits and a more complex flavor profile. It’s a versatile recipe that promises to become a favorite in your household.
If you cherish baking with sourdough, you’ll find these pumpkin muffins align perfectly with your passion for wholesome, homemade treats. They stand proudly alongside our other beloved sourdough creations, such as the soft and flavorful Sourdough Blueberry Muffins, the invitingly spiced Sourdough Apple Cinnamon Muffins, and the always-popular Sourdough Banana Bread. Each recipe is designed to be accessible and delicious, transforming simple ingredients into extraordinary baked goods.
So, get ready to embrace the autumn spirit and fill your kitchen with the irresistible scent of pumpkin spice and the wholesome goodness of sourdough. Let’s dive into making these incredible sourdough pumpkin muffins!
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Recipe Highlights: Why You’ll Love These Sourdough Pumpkin Muffins
These sourdough pumpkin muffins aren’t just a seasonal treat; they’re a celebration of flavor, texture, and wholesome ingredients. Here’s what makes them truly stand out:
- Rich & Authentic Pumpkin Flavor: We keep it delightfully simple by focusing on pure pumpkin puree and a generous amount of high-quality pumpkin pie spice. This combination ensures a warm, inviting flavor that isn’t overwhelmed by too many competing ingredients. Every bite is a comforting taste of autumn, evoking memories of holidays and cozy evenings. The balanced spice blend – typically cinnamon, nutmeg, ginger, and cloves – perfectly complements the natural sweetness of the pumpkin without being overly complex.
- Incredibly Tender and Moist Crumb: Prepare for a melt-in-your-mouth experience. These muffins are renowned for their super fluffy and soft texture, which comes from the combination of pumpkin puree (a natural moisturizer) and the unique characteristics of sourdough. The fermentation process of sourdough contributes to a lighter, more open crumb, resulting in muffins that are exceptionally tender and never dry. It’s no wonder my kids declared these to be the best muffins they’ve ever had!
- Made with Simple, Wholesome Ingredients: You won’t find any obscure items on this ingredient list. This recipe relies on basic pantry staples you likely already have on hand, along with fresh pumpkin puree. Using real, identifiable ingredients means you’re providing a nourishing treat for your family without any artificial additives or preservatives. It’s the kind of honest baking that truly feeds the soul.
- An Excellent Way to Use Sourdough Discard or Active Starter: Sourdough starter is a living thing, and consistent feeding often leads to an abundance of discard. This recipe offers a delicious and practical solution for putting that extra starter to good use. Whether your starter is active and bubbly or patiently waiting as discard, it adds a unique depth of flavor and contributes to the muffins’ wonderful texture, all while reducing kitchen waste. It’s a win-win for both taste and sustainability.
Essential Sourdough Pumpkin Muffin Ingredients

Crafting the perfect sourdough pumpkin muffin starts with selecting quality ingredients. Each component plays a vital role in achieving that sought-after flavor and texture:
- Sourdough Starter: This is the star of our recipe. You can use either active (fed and bubbly) or unfed (discard) sourdough starter. Active starter will impart a milder sourdough flavor and contribute more to the leavening, while discard often yields a slightly tangier muffin, adding a wonderful complexity. Both types can be used for the optional long fermentation process, which enhances digestibility and flavor.
- Pure Pumpkin Puree: This is crucial for the authentic pumpkin flavor and incredible moisture. Always ensure you are using pure canned pumpkin or homemade pumpkin puree, not pumpkin pie filling. Pumpkin pie filling contains added sugars and spices that would alter the balance of this recipe. The puree also gives these muffins their characteristic vibrant orange color.
- Vanilla Extract: A touch of vanilla elevates all the other flavors. Whether you use a high-quality store-bought extract or your own homemade vanilla, it adds a subtle warmth and sweetness that complements the pumpkin and spices beautifully.
- Unsalted Butter: Using unsalted butter is key for controlling the overall salt content in your muffins. It provides a rich, buttery flavor and contributes to the moist, tender crumb. If you only have salted butter, you can reduce the amount of added salt in the recipe by about a quarter teaspoon per half cup of butter.
- All-Purpose Flour: The foundation of our muffins, providing structure. While all-purpose flour works wonderfully, you can experiment with a blend of all-purpose and whole wheat pastry flour for added nutrition and a slightly nuttier flavor, especially if you plan on a long fermentation.
- Sugars (Granulated and Brown): A combination of white granulated sugar and brown sugar provides both sweetness and moisture. Brown sugar, with its molasses content, adds a deeper, more caramel-like flavor and ensures a wonderfully moist muffin.
- Eggs: Eggs act as a binder, provide structure, and contribute to the richness and moistness of the muffins. Ensure they are at room temperature for better incorporation into the batter.
- Salt: Essential for balancing flavors and enhancing the sweetness of the pumpkin and spices.
- Baking Soda & Baking Powder: These leavening agents work in conjunction with the sourdough starter to give the muffins a perfect rise and fluffy texture. Baking soda reacts with the acidic sourdough and pumpkin, while baking powder provides an extra lift.
- Pumpkin Pie Spice: The quintessential fall spice blend! This pre-mixed spice blend typically includes cinnamon, nutmeg, ginger, and cloves, delivering all the warm, aromatic notes characteristic of pumpkin desserts.
A complete list of all ingredients with specific quantities can be found in the detailed recipe card below.
Discover More Delicious Pumpkin Recipes:
If you’re as enamored with pumpkin as we are, you’ll love exploring these other delightful pumpkin-focused recipes. They offer unique ways to enjoy this versatile squash throughout the autumn season and beyond:
- Sourdough Pumpkin Bread: A wholesome and flavorful quick bread that’s perfect for breakfast or a snack.
- Pumpkin Spice Granola: A crunchy, warmly spiced granola that makes an excellent breakfast cereal or topping.
- Sourdough Discard Pumpkin Pancakes: Start your day with these fluffy, pumpkin-infused pancakes – a delicious way to use up sourdough discard.
- Pumpkin Pie Overnight Oats: A convenient and healthy breakfast option that tastes just like pumpkin pie.
Essential Tools for Baking Sourdough Pumpkin Muffins
Having the right kitchen tools can make the baking process smoother and more enjoyable. For these sourdough pumpkin muffins, you’ll need a few basic items:
- Muffin Tin (with Muffin Liners): A standard 12-cup muffin tin is perfect for this recipe. Using muffin liners not only makes for easier cleanup but also helps the muffins release cleanly and look professional. I highly recommend investing in a good quality muffin pan for even baking results.
- Large Mixing Bowls: You’ll need at least two spacious mixing bowls – one for dry ingredients and one for wet ingredients – before combining them.
- Whisk and Spatula: For thoroughly mixing ingredients and gently folding the wet into the dry.
- Stand Mixer or Hand Mixer (Optional): While not strictly necessary, a stand mixer or hand mixer can make the process of combining wet ingredients quicker and ensure a smooth, lump-free batter. If you don’t have one, a good old-fashioned whisk and some elbow grease will do the job perfectly.
- Measuring Cups and Spoons: Accurate measurements are crucial in baking, so ensure you have a reliable set.
Step-by-Step: How to Make Delightful Sourdough Pumpkin Muffins
Follow these simple instructions to bake a batch of warm, spiced sourdough pumpkin muffins that will brighten any day. Remember, precision and a gentle touch are key for the best results!

Step 1: Prepare Your Dry Ingredients. Begin by preheating your oven to 375°F (190°C). In a large mixing bowl, combine the all-purpose flour, salt, baking soda, baking powder, and pumpkin spice. Use a whisk to thoroughly mix these dry ingredients together, ensuring they are well combined and there are no lumps of leavening agents or spices. This step is important for an even rise and consistent flavor throughout your muffins. Set this bowl aside for now.

Step 2: Combine Wet Ingredients for Flavor and Moisture. In a separate, medium-sized bowl (or the bowl of your stand mixer if using), add the sourdough starter (active or discard), melted unsalted butter, granulated sugar, lightly packed brown sugar, pure pumpkin puree, eggs, and vanilla extract. Whisk or mix these ingredients together thoroughly until they are completely combined and smooth. Ensure there are no streaks of unmixed ingredients, especially the sugars. This wet mixture forms the flavor base and moisture content of your muffins.

Step 3: Gently Incorporate Wet and Dry Ingredients. Pour the wet ingredient mixture into the bowl with the dry ingredients. Using a spatula or a wooden spoon, gently stir until just combined. The key here is not to overmix! Overmixing can develop the gluten in the flour too much, resulting in tough, dry muffins. A few lumps are perfectly fine and often lead to a more tender muffin. Stop mixing as soon as no dry streaks of flour are visible.

Step 4: Fill Muffin Tins and Customize. Prepare your muffin tin by lining it with paper liners or greasing each cup thoroughly. Evenly distribute the muffin batter among the prepared muffin cups. For bakery-style muffins with beautiful, domed tops, I like to fill the muffin cups almost all the way to the top. If you desire an extra treat, this is the perfect moment to stir in some chocolate chips or chopped nuts to create delicious sourdough pumpkin chocolate chip muffins or nutty pumpkin muffins.

Step 5: Bake to Golden Perfection. Place the muffin tin into your preheated 375°F (190°C) oven. Bake for approximately 22-24 minutes. Baking times can vary slightly depending on your oven, so keep an eye on them. The muffins are ready when their tops turn a beautiful golden color, and a wooden toothpick inserted into the center of a muffin comes out clean or with only a few moist crumbs attached. Avoid overbaking to maintain their moist texture. Once baked, let them cool in the tin for a few minutes before transferring to a wire rack to cool completely.
Elevate Your Muffins: How to Make Long-Fermented Pumpkin Muffins
Long fermentation isn’t just a trend; it’s a traditional method that offers several benefits, including improved digestibility, enhanced flavor complexity, and increased nutrient availability. By allowing the sourdough starter to work its magic over a longer period, you transform these already delicious muffins into an even more nourishing and flavorful treat. Here’s how to adapt the recipe for a long fermentation:
- Initial Fermentation Mixture: In a large mixing bowl, combine your sourdough starter (active or discard), sugar, melted butter, and flour. Mix thoroughly until all the flour is just moistened and combined. The consistency will be quite thick and crumbly at this stage, which is perfectly normal. You may need to add a tiny bit more sourdough starter if there are too many dry bits to ensure it’s all integrated.
- First Fermentation Stage: Cover the bowl securely with plastic wrap or a damp kitchen towel to prevent it from drying out. Allow this mixture to ferment at room temperature for 12-24 hours. The duration depends on the ambient temperature of your kitchen and how tangy you want your muffins to be. A longer fermentation will result in a more pronounced sourdough tang and potentially greater health benefits.
- Preheat and Prepare for Baking: The next day, after the fermentation is complete, preheat your oven to 375°F (190°C) and line or grease your muffin tins as you would for the standard recipe.
- Final Batter Assembly: To the fermented batter, add the remaining ingredients: pumpkin puree, eggs, salt, baking soda, baking powder, and vanilla extract. If using a stand mixer, attach the paddle attachment and mix on low to medium speed until all ingredients are well combined. If mixing by hand, use a sturdy spatula to gently incorporate everything. Again, be careful not to overmix; just combine until uniform.
- Bake as Usual: Distribute the finished batter into the prepared muffin tins. Bake for 22-25 minutes, or until a toothpick inserted into the center comes out clean. The long-fermented muffins will have a slightly different texture and a richer, more nuanced flavor.
This method truly transforms the muffins, making them a unique and health-conscious option for those who appreciate the benefits of sourdough.
Storing Your Sourdough Pumpkin Muffins for Optimal Freshness
Proper storage is essential to keep your delicious sourdough pumpkin muffins fresh, moist, and enjoyable for as long as possible. Here are the best ways to store them:
- Room Temperature Storage: To maintain their soft, fresh-baked texture for everyday enjoyment, store your muffins in an airtight container at room temperature. They will remain wonderfully fresh for up to three days. Make sure they are completely cooled before placing them in the container to prevent condensation, which can make them soggy.
- Refrigerator Storage: For extended freshness, especially if you live in a warm or humid climate, you can store the muffins in an airtight container in the refrigerator for up to one week. When you’re ready to enjoy them, simply warm them slightly in the microwave or oven to bring back that delightful, soft texture and release their warm aromas.
- Freezing for Long-Term Enjoyment: These muffins freeze beautifully, making them perfect for meal prep or having a quick treat on hand. First, allow the muffins to cool completely on a wire rack. Once cooled, place them in a single layer in a freezer-safe bag or an airtight container. They can be stored in the freezer for up to three months without compromising flavor or texture. When you crave a warm, cozy muffin, simply thaw them at room temperature for a few hours, or gently reheat them in the oven (at 300°F/150°C for 5-10 minutes) or microwave (for 30-60 seconds) until warmed through.
Expert Tips for Perfect Sourdough Pumpkin Muffins Every Time

Achieving bakery-quality sourdough pumpkin muffins is easier than you think with these helpful tips:
- Fill Muffins Cups Generously: For those coveted tall, domed muffin tops, don’t be shy about filling your muffin cups! I recommend filling them almost to the very top. This generous portion of batter helps create a beautiful crown as the muffins bake, giving them that appealing, homemade bakery look.
- Sourdough Starter Versatility: This recipe is incredibly forgiving and works equally well with either an active, bubbly sourdough starter or a well-fed discard. Both will contribute to the unique flavor and texture of these muffins. If you’re using discard, especially older discard, the muffins will have a more pronounced tangy sourdough flavor, which many find delightful. Both can also be used for the long fermentation method, offering flexibility in your baking schedule.
- Don’t Overmix the Batter: This is a golden rule for muffins! Once you combine the wet and dry ingredients, mix them only until they are *just* combined. A few small lumps are perfectly acceptable and actually desirable. Overmixing develops gluten, which can lead to dense, tough, and chewy muffins instead of light and tender ones.
- Room Temperature Ingredients: Ensure your eggs and sourdough starter are at room temperature. Room temperature ingredients emulsify more easily, resulting in a smoother, more uniform batter and a better texture in your final muffins.
- Customize with Add-ins: Feel free to get creative with additions! While delicious on their own, these muffins are fantastic with a handful of chocolate chips, chopped walnuts, pecans, or even a streusel topping. Add these in with the wet ingredients or sprinkle them on top before baking.
- Bake Immediately After Mixing (Unless Long-Fermenting): If you’re not doing a long fermentation, it’s best to bake the muffins immediately after mixing the wet and dry ingredients. The leavening agents (baking soda and powder) start working as soon as they are combined with liquid, so baking promptly ensures maximum rise.
- Double or Triple the Recipe for Future Enjoyment: If you want to have a stash of delicious muffins on hand, consider doubling or even tripling the recipe. Just make sure your muffins are completely cooled before storing them in the freezer to prevent ice crystals and maintain their fresh quality. This is a great strategy for quick breakfasts or unexpected guests.
Frequently Asked Questions About Sourdough Pumpkin Muffins
Here are answers to some common questions you might have about making and enjoying these delightful sourdough pumpkin muffins:
To maintain their tender texture and delicious flavor, store your sourdough pumpkin muffins in an airtight container at room temperature for up to three days. For longer storage, you can refrigerate them for up to one week. For the longest freshness, freeze the cooled muffins in a freezer-safe bag or container for up to 3 months. When ready to enjoy, simply thaw them at room temperature or gently warm them in the oven (at 300°F for about 5-10 minutes) or microwave for a quick and cozy treat.
While these sourdough pumpkin muffins do contain natural sugars, they are made with real, wholesome ingredients like pumpkin puree, which is packed with beneficial vitamins and minerals, particularly Vitamin A. This makes them a more nourishing option compared to many store-bought muffins. To enhance their health profile further, you could experiment by slightly reducing the amount of granulated sugar, or by swapping a portion of the all-purpose flour for whole wheat flour or whole wheat pastry flour. Using the long-fermentation method can also increase the digestibility and nutrient availability, making them an even healthier choice.
Absolutely! This recipe is well-suited for an overnight fermentation, which can develop a deeper flavor and offer additional health benefits. To do so, you will need to separate the ingredients. Mix the sourdough starter, flour, sugar, and melted butter together the night before. Cover the mixture and let it ferment at room temperature for 12-24 hours. The next day, simply add the remaining ingredients – pumpkin puree, eggs, salt, baking soda, baking powder, and vanilla – to the fermented mixture, combine gently, and then proceed with baking as directed. This method creates a wonderful depth of flavor and texture in your muffins.
Yes, absolutely! Homemade pumpkin puree works wonderfully in this recipe and can even enhance the fresh pumpkin flavor. Just ensure your homemade puree is thick, smooth, and free of excess water. If it seems a bit watery, you can gently simmer it on the stovetop to reduce some of the moisture before using it in the recipe, ensuring your muffins aren’t too wet.
Active starter is bubbly and fed, contributing more to the rise and a milder sourdough flavor. Sourdough discard (unfed starter) will still add flavor and moisture but will provide less leavening power. Because this recipe uses baking soda and baking powder, it works well with both, ensuring a good rise either way. Using discard is a great way to prevent waste and can often result in a slightly more pronounced tangy flavor, which many find appealing.
Love This Recipe? Explore Our Other Sourdough and Homemade Delights!
If you enjoyed baking these sourdough pumpkin muffins, you’ll surely appreciate our other carefully crafted recipes. Each one is designed to bring joy and wholesome goodness to your kitchen, featuring simple ingredients and delicious results. Explore a new favorite today!
- Sourdough Blueberry Cream Cheese Bread: A rich and fruity bread with a delightful cream cheese swirl, perfect for brunch.
- Easy Strawberry Crumble: A simple, comforting dessert bursting with fresh strawberry flavor, often gluten-free and healthy.
- Sourdough Apple Scones: Flaky, tender scones infused with apple and cinnamon, topped with a sweet glaze.
- The Best Sourdough Biscuits: Light, fluffy, and incredibly savory, these biscuits are perfect with any meal.
- Chocolate Coconut Granola Bars: A healthy and satisfying snack, packed with flavor and dietary flexibility.
If you try this delightful recipe and absolutely love it, we would be incredibly grateful if you could come back, leave a comment on the post, and give it a well-deserved 5 stars! Your feedback helps us and other home bakers immensely. Please and thank you! Don’t forget to tag us on Instagram @ablossominglife when you share your creations!

Sourdough Pumpkin Muffins
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Equipment
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Stand mixer
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Muffin tin
Ingredients
- 1 cup sourdough starter active or discard, at room temperature
- 2 cups all-purpose flour
- 1/2 cup melted unsalted butter
- 1/2 cup granulated sugar
- 1/2 cup brown sugar lightly packed, for added moisture and flavor
- 1 cup pure pumpkin puree not pumpkin pie filling
- 3 large eggs at room temperature
- 1/2 tsp fine sea salt
- 1 tsp baking soda
- 1/2 tsp baking powder
- 1 tsp pure vanilla extract
- 1 tablespoon pumpkin pie spice
Instructions
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Preheat your oven to 375°F (190°C). In a large mixing bowl, thoroughly whisk together the all-purpose flour, salt, baking soda, baking powder, and pumpkin spice until well combined. Set this dry mixture aside.
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In a separate medium bowl, or the bowl of a stand mixer, combine the sourdough starter (active or discard), melted butter, granulated sugar, brown sugar, pure pumpkin puree, eggs, and vanilla extract. Mix well with a whisk or electric mixer until the mixture is smooth and all ingredients are fully incorporated.
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Pour the wet ingredients into the bowl with the dry ingredients. Gently stir them together using a spatula or wooden spoon until they are just combined. Be careful not to overmix the batter; a few lumps are fine and will result in a more tender muffin.
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Line a 12-cup muffin tin with paper liners, or grease each muffin cup thoroughly. Distribute the batter evenly among the prepared muffin cups. For bakery-style muffins with high, domed tops, fill the muffin cups almost all the way to the top. For an extra treat, feel free to fold in a handful of chocolate chips or chopped nuts at this stage to make sourdough pumpkin chocolate chip muffins or nutty variations.
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Bake in the preheated oven for 22-24 minutes, or until the muffins are golden brown on top and a wooden toothpick inserted into the center comes out clean or with only moist crumbs attached. Avoid overbaking. Let the muffins cool in the tin for a few minutes before transferring them to a wire rack to cool completely.
Notes
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- For beautiful, full muffin tops, make sure to fill your muffin cups almost to the very top with batter before baking.
- This versatile recipe works perfectly with either an active, bubbly sourdough starter or unfed sourdough discard. Both will yield delicious results, and either can be used for the optional long-fermentation process.
- If you wish to have extra muffins on hand for quick breakfasts or snacks, consider doubling or tripling the recipe. Ensure the muffins are completely cooled before freezing to maintain their texture.
- Store baked sourdough pumpkin muffins in an airtight container at room temperature for up to three days, or in the refrigerator for up to one week. For longer preservation, freeze them in a freezer-safe container for up to 3 months.
- Avoid overmixing the batter, as this can lead to tough, dense muffins. Mix only until the wet and dry ingredients are just combined.
- Feel free to add up to 1/2 cup of chocolate chips, chopped nuts (like walnuts or pecans), or even dried cranberries to the batter for delightful variations.